snippetbashTip
sh5util — Merge HDF5 files produced by the `sacct_gather_profile` plugin. More information: <https://slurm.sch
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thecommandfileshdf5clish5utilmergeproduced
linux
Problem
How to use the
sh5util command: Merge HDF5 files produced by the sacct_gather_profile plugin. More information: <https://slurm.schedmd.com/sh5util.html>.Solution
sh5util — Merge HDF5 files produced by the sacct_gather_profile plugin. More information: <https://slurm.schedmd.com/sh5util.html>.Merge HDF5 files produced on each allocated node for the specified job or step:
sh5util {{[-j|--jobs]}} {{job_id|job_id.step_id}}Extract one or more data series from a merged job file:
sh5util {{[-j|--jobs]}} {{job_id|job_id.step_id}} {{[-E|--extract]}} {{[-i|--input]}} {{path/to/file.h5}} {{[-s|--series]}} {{Energy|Filesystem|Network|Task}}Extract one data item from all nodes in a merged job file:
sh5util {{[-j|--jobs]}} {{job_id|job_id.step_id}} {{[-I|--item-extract]}} {{[-s|--series]}} {{Energy|Filesystem|Network|Task}} {{[-d|--data]}} {{data_item}}Code Snippets
Merge HDF5 files produced on each allocated node for the specified job or step
sh5util {{[-j|--jobs]}} {{job_id|job_id.step_id}}Extract one or more data series from a merged job file
sh5util {{[-j|--jobs]}} {{job_id|job_id.step_id}} {{[-E|--extract]}} {{[-i|--input]}} {{path/to/file.h5}} {{[-s|--series]}} {{Energy|Filesystem|Network|Task}}Extract one data item from all nodes in a merged job file
sh5util {{[-j|--jobs]}} {{job_id|job_id.step_id}} {{[-I|--item-extract]}} {{[-s|--series]}} {{Energy|Filesystem|Network|Task}} {{[-d|--data]}} {{data_item}}Context
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